Personal profile
Research expertise
Koen Bartholomeeusen graduated as a Master in Biomedical Sciences from the University of Antwerp (UA) in 2003. He went on to perform doctoral studies at the Catholic University of Leuven (KULeuven) obtaining the degree of Doctor in Medical Sciences in 2009. During this period Koen studied host cell factors contributing to HIV-1 replication in the lab of Prof. Debyser. At the time already HIV-1 disease had, from a therapeutic standpoint, become a chronic ailment due to the ready availability of potent antivirals and curing patient would require removing residually infected cells from the body. One aspect towards this goal is the reactivation of transcriptionally silent virus to allow re-exposure of infected cells to the immune system. Focusing on these themes, as a postdoctoral fellow at the University of California San Francisco (UCSF) in the lab of Prof. Peterlin (2010-2014), Koen studied basic molecular aspects of HIV-1 transcriptional control and the potential of small molecule drugs to reverse the silenced transcriptional activity of the latent HIV-1 provirus. Returning to Europe, Koen joined the lab of Prof. Blazek at the Central European Institute of Technology (CEITEC) in Czech Republic (2014-2015) to continue some of the studies into basic transcriptional processes before joining the lab of Prof. Ariën at the Institute of Tropical Medicine (ITM) in Antwerp (2015-..). As a senior researcher in the Virology Unit at ITM Koen studies the molecular aspects of virus-host interactions of arboviruses and their replication in human and mosquito. His research includes determination of viral genetic characteristics governing vector/host specific interactions and the virus-host protein interactome of arboviruses with the emphasis on innate immune and basic cellular biological aspects of viral replication in both organisms with the ultimate goal of understanding and preventing the pathologies and suppressing viral replication in light of the limited therapeutic options available today.
Keywords
- B230-virology
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Collaborations and top research areas from the last five years
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saRplix: Optimization of self-amplifying RNA and mRNA production and formulation through advanced microfluidics
Ariën, K. (Promotor) & Bartholomeeusen, K. (PI)
1/10/25 → 30/09/29
Project: Research Project
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RiVAc: RNAi based Vaccine development in the Aedes albopictus mosquito against chikungunya virus
Ariën, K. (Promotor), Bartholomeeusen, K. (PI), Müller, R. (CoPI), Brustolin, M. (CoPI) & Janssens, E. (PhD Student)
Flemish Government - Department of Work, Economy, Science, Innovation
1/01/25 → 31/12/28
Project: Research Project
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FA5 PERU: Better policies and less infectious diseases in Peru and Latin America
Verdonck, T. (Copromotor), Rosanas-Urgell, A. (PI), Mutsaers, M. (Researcher), Nieto Sanchez, C. (Researcher), Kattenberg, E. (Researcher), Müller, R. (PI), Bartholomeeusen, K. (Researcher), Eddyani, M. (Researcher), Hyland, P. (Researcher), Van der Auwera, G. (Promotor), Rosanas-Urgell, A. (PI), Müller, R. (PI) & Dens, S. (Researcher)
Directorate-General for Development Cooperation and Humanitarian Aid
1/01/22 → 31/12/26
Project: Development project
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Identification of the T cell receptor (TCR) repertoire associated with sustained joint pains in chronic chikungunya virus disease
Bartholomeeusen, K. (Promotor), Ariën, K. (Copromotor), Ogunjimi, B. (Promotor), Laukens, K. (Copromotor), Meysman, P. (Copromotor) & Bartholomeeusen, K. (PI)
Flemish Government - Department of Economy, Science & Innovation
1/01/23 → 30/09/23
Project: Research Project
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CHIKV nsP1: A common strategy for counteracting antiviral mechanisms in human and mosquito by CHIKV nsP1
Ariën, K. (Promotor), Bartholomeeusen, K. (PI) & Janssens, N. (Administrator)
Flemish Government - Department of Economy, Science & Innovation
1/01/22 → 30/09/22
Project: Research Project
Research output
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Identification of a TCR signature in peripheral blood derived CD4+T cells, associated with chronic chikungunya disease, suggests a conducive, female-biased, background immune profile
Bartholomeeusen, K., Affaticati, F., Willems, E., Dhondt, E., Bartholomeus, E., Maestri, A., Ly, S., Veasna, D., Ogunjimi, B., Meysman, P., Laukens, K., Cantaert, T. & Arien, K. K., 11-Mar-2026, In: Frontiers in Immunology. 17, 12 p., 1739100.Research output: Contribution to journal › A1: Peer-reviewed journal articles › peer-review
Open Access -
Low risk of transmission of prototype and newly emerged Oropouche virus strains by European Culex pipiens, Aedes albopictus, and Anopheles atroparvus mosquitoes
Rosales-Rosas, A., Janssens, E., Verwimp, S., Bartholomeeusen, K., Van Dun, C., Trappeniers, K., Ariën, K. K., Müller, R., Delang, L. & Brustolin, M., 12-Jan-2026, In: PLoS Neglected Tropical Diseases. 20, 1, 12 p., e0013879.Research output: Contribution to journal › A1: Peer-reviewed journal articles › peer-review
Open Access -
Research on the genome of microorganisms: ethical considerations and recommendations regarding the incidental bystander sequencing of human genetic material
Bartholomeeusen, K., Monsieurs, P., Van Den Abbeele, J., Moris, P., Goovaerts, O., Pinxten, W., Verellen, J., Tzfadia, O., Verdonck, K. & Ravinetto, R., 3-Mar-2026, (E-pub ahead of print) In: Lancet Microbe. p. 101341Research output: Contribution to journal › Review › peer-review
Open AccessFile1 Downloads (Pure) -
Mayaro virus, a potential threat for Europe: vector competence of autochthonous vector species
Brustolin, M., Bartholomeeusen, K., Teodoro Rezende, T., Ariën, K. & Müller, R., 2024, In: Parasites and Vectors. 17, 9 p., 200.Research output: Contribution to journal › A1: Peer-reviewed journal articles › peer-review
Open Access -
Chikungunya fever
Bartholomeeusen, K., Daniel, M., LaBeaud, D. A., Gasque, P., Peeling, R. W., Stephenson, K. E., Ng, L. F. P. & Ariën, K. K., 2023, In: Nature Reviews Disease Primers. 9, 1, p. 17Research output: Contribution to journal › A1: Peer-reviewed journal articles › peer-review