Projects per year
Personal profile
Research expertise
Pure input
Koen Vercauteren obtained an MSc in Pharmaceutical Sciences (2010, Ghent University, Belgium), a PhD in pre-clinical viral hepatitis research (2014, Ghent University hospital, Belgium, Promoted by Profs. Philip Meuleman and Geert Leroux-Roels), continued his academic track on a BAEF post-doctoral scholarship in pre-clinical viral hepatitis research and viral vectors for gene therapy (2014-2016, Rockefeller University, NYC, USA, Charles M. Rice lab, 2020 Nobel Prize in Medicine recipient). Then, he graduated the clinical specialty programme in laboratory medicine (clinical chemistry, haematology, and microbiology) (2016-2019, Ghent University hospital, Belgium).
Since 2019, he is a professor at ITM, head of the clinical virology unit and clinical biologist at the ITM clinical reference lab. The clinical virology lab (co-)hosts 2 laboratory technicians, 2 PhD students (1 on a pre-doctoral FWO mandate), 1 postdoctoral researcher, and has promoted an MSc in tropical medicine and MSc in public health. He has (co-)authored 33 (13 of which as first author) peer reviewed papers in the field of viral hepatitis, viral vectors for gene therapy and laboratory medicine (1147 citations). His current research focusses on (viral) infectious disease laboratory medicine.
Research interests
- Designing T-cell receptor sequencing (TCRseq)-based diagnostic assays and biomarkers
- Developing molecular techniques for broad detection of tropical viral pathogens (metagenomic next-generation sequencing).
- Evaluating Point of Care testing methods (Antigen rapid diagnostic tests as well as nucleic acid detection principles) for use in low-and-middle-income countries (examples: SARS-CoV-2, viral hemorrhagic fevers)
Teaching
- ITM PhD commission member (2022-)
- PhD supervision
- MSc supervision (Tropical Medicine, Public Health, Global One-Health)
Education/Academic qualification
Medicine, PhD, Targeting SR-BI for the prevention and treatment of hepatitis C virus infections, Ghent University
Award Date: 31-Jul-2014
Pharmaceutical Sciences, Master, master in Pharmaceutical Sciences, Ghent University
Award Date: 30-Jul-2010
External positions
Resident in Clinical Biology
2016 → 2019
Post-doctoral research , Rockefeller University
2014 → 2016
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Collaborations and top research areas from the last five years
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Developing, evaluating, and deploying a Wet and Dry Laboratory Pipeline for monitoring and characterizing arboviral pathogens using virus-enriched metagenomic sequencing
De Souza Novaes, A., Vercauteren, K., Ariën, K. & Rezende, A. M.
1/01/24 → …
Project: PhD-project
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FORTIFIEDx: Multifunctional microfluidic patch for infectious diseases diagnosis
Vercauteren, K. & Vercauteren, K.
1/08/23 → 31/07/27
Project: Research Project
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Improving the clinical management and facility-based surveillance of febrile illness in rural Guinea: a multidisciplinary approach
Kourouma, K., Bottieau, E., Vercauteren, K., Liesenborghs, L., Vlieghe, E. & Delamou, A.
1/01/23 → …
Project: PhD-project
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High throughput T cell repertoire sequencing-based analysis of T cell subsets as a viral diagnostic tool
Vujkovic, A., Vercauteren, K., Laukens, K. & Meysman, P.
6/07/22 → …
Project: PhD-project
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SOFI 2021: Clinical research platform for untargeted RNA virus detection in tropical fever patient populations: construction and application
Vercauteren, K., Selhorst, P., Ariën, K., Van Esbroeck, M. & Vercauteren, K.
Flemish Government - Department of Economy, Science & Innovation
1/01/21 → 31/12/24
Project: Research Project
Research output
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Breakthrough Mpox Outbreak Investigation, the Delicate Balance Between Host Immune Response and Viral Immune Escape
Moretti, M., Meuwissen, A., Rezende, AM., Zange, S., Van Nedervelde, E., de Block, T., Vercauteren, K., Demuyser, T. & Allard, SD., 2024, In: Sexually Transmitted Diseases. 51, 7, p. 499-503 5 p.Research output: Contribution to journal › A1: Web of Science-article › peer-review
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Co-circulation of monkeypox virus subclades Ia and Ib in Kinshasa Province, Democratic Republic of the Congo, July to August 2024
Wawina-Bokalanga, T., Akil-Bandali, P., Kinganda-Lusamaki, E., Lokilo, E., Jansen, D., Amuri-Aziza, A., Makangara-Cigolo, JC., Pukuta-Simbu, E., Ola-Mpumbe, R., Muyembe-Tamfum, JJ., Kacita, C., Paku-Tshambu, P., Dantas, PH., Tshiani-Mbaya, O., Luakanda, G., Nkuba-Ndaye, A., Matondo, M., Vakaniaki, EH., Tessema, S., Ndembi, N., & 18 others , 2024, In: Eurosurveillance. 29, 38, 6 p., 2400592.Research output: Contribution to journal › Editorial
Open Access -
Diagnosing viral infections through T-cell receptor sequencing of activated CD8+ T cells
Vujkovic, A., Ha, M., de Block, T., van Petersen, L., Brosius, I., Theunissen, C., van Ierssel, SH., Bartholomeus, E., Adriaensen, W., Vanham, G., Elias, G., Van Damme, P., Van Tendeloo, V., Beutels, P., van Frankenhuijsen, M., Vlieghe, E., Ogunjimi, B., Laukens, K., Meysman, P. & Vercauteren, K., 2024, In: Journal of Infectious Diseases. 229, 2, p. 507-516 10 p.Research output: Contribution to journal › A1: Web of Science-article › peer-review
Open Access -
No evidence for clade I monkeypox virus circulation, Belgium
Liesenborghs, L., Coppens, J., Van Dijck, C., Brosius, I., De Baetselier, I., Vercauteren, K. & Van Esbroeck, M., 2024, In: Emerging Infectious Diseases. 30, 2, p. 402-402Research output: Contribution to journal › Letter › peer-review
Open Access -
Potential determinants of the decline in mpox cases in Belgium: A behavioral, epidemiological and seroprevalence study
De Vos, E., Van Gestel, L., Brosius, I., Kenyon, C., Vuylsteke, B., De Baetselier, I., Mariën, J., Bangwen, E., Couvreur, S., Lecompte, A., Van Beckhoven, D., Hoorelbeke, B., Verstrepen, BE., Zaeck, LM., de Vries, RD., van Kessel, CHG., Hens, N., Ariën, KK., Vercauteren, K., Van Esbroek, M., & 2 others , 2024, In: International Journal of Infectious Diseases. 146, 9 p., 107132.Research output: Contribution to journal › A1: Web of Science-article › peer-review
Open Access