Projects per year
Personal profile
Research expertise
Pure input
Koen Vercauteren obtained an MSc in Pharmaceutical Sciences (2010, Ghent University, Belgium), a PhD in pre-clinical viral hepatitis research (2014, Ghent University hospital, Belgium, Promoted by Profs. Philip Meuleman and Geert Leroux-Roels), continued his academic track on a BAEF post-doctoral scholarship in pre-clinical viral hepatitis research and viral vectors for gene therapy (2014-2016, Rockefeller University, NYC, USA, Charles M. Rice lab, 2020 Nobel Prize in Medicine recipient). Then, he graduated the clinical specialty programme in laboratory medicine (clinical chemistry, haematology, and microbiology) (2016-2019, Ghent University hospital, Belgium).
Since 2019, he is a professor at ITM, head of the clinical virology unit and clinical biologist at the ITM clinical reference lab. The clinical virology lab (co-)hosts 2 laboratory technicians, 2 PhD students (1 on a pre-doctoral FWO mandate), 1 postdoctoral researcher, and has promoted an MSc in tropical medicine and MSc in public health. He has (co-)authored 33 (13 of which as first author) peer reviewed papers in the field of viral hepatitis, viral vectors for gene therapy and laboratory medicine (1147 citations). His current research focusses on (viral) infectious disease laboratory medicine.
Research interests
- Designing T-cell receptor sequencing (TCRseq)-based diagnostic assays and biomarkers
- Developing molecular techniques for broad detection of tropical viral pathogens (metagenomic next-generation sequencing).
- Evaluating Point of Care testing methods (Antigen rapid diagnostic tests as well as nucleic acid detection principles) for use in low-and-middle-income countries (examples: SARS-CoV-2, viral hemorrhagic fevers)
Teaching
- ITM PhD commission member (2022-)
- PhD supervision
- MSc supervision (Tropical Medicine, Public Health, Global One-Health)
Education/Academic qualification
Medicine, PhD, Ghent University
Award Date: 31-Jul-2014
Pharmaceutical Sciences, Master, Ghent University
Award Date: 30-Jul-2010
External positions
Resident in Clinical Biology
2016 → 2019Post-doctoral research , Rockefeller University
2014 → 2016Fingerprint
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Collaborations and top research areas from the last five years
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Improving the clinical management and facility-based surveillance of febrile illness in rural Guinea: a multidisciplinary approach
Kourouma, K., Bottieau, E., Vercauteren, K., Liesenborghs, L., Vlieghe, E. & Delamou, A.
1/01/23 → …
Project: PhD-project
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APPLIEDx: Integrated point-of-care platform for infectious diseases diagnosis
Vercauteren, K., Van den Bossche, D. & Mertens, K.
1/10/22 → 30/09/26
Project: Research Project
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High throughput T cell repertoire sequencing-based analysis of T cell subsets as a viral diagnostic tool
Vujkovic, A., Vercauteren, K., Laukens, K. & Meysman, P.
6/07/22 → …
Project: PhD-project
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METATROPICS: Clinical research platform for untargeted RNA virus detection in tropical fever patient populations: construction and application
Vercauteren, K., Selhorst, P., Ariën, K., Van Esbroeck, M. & Khamunde, J. A.
Flemish Government - Department of Economy, Science & Innovation
1/01/21 → 31/12/24
Project: Research Project
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Machine learning framework for T-cell receptor repertoire-based viral diagnostics
Postovskaya, A., Vercauteren, K., Laukens, K., Meysman, P., Vanham, G. & Vanham, G.
3/11/20 → …
Project: PhD-project
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Alternative sampling specimens for the molecular detection of mpox (formerly monkeypox) virus
ITM MPX Study Group, 2023, In: Journal of Clinical Virology. 159, 4 p., 105372.Research output: Contribution to journal › A1: Web of Science-article › peer-review
Open AccessFile98 Downloads (Pure) -
Characteristics of confirmed mpox cases among clinical suspects: a prospective single-centre study in Belgium during the 2022 outbreak
ITM Monkeypox Study Group, 2023, In: New Microbes and New Infections. 52, p. 101093 7 p.Research output: Contribution to journal › A1: Web of Science-article › peer-review
Open AccessFile97 Downloads (Pure) -
Detection of mpox virus in ambient air in a sexual health clinic
Raymenants, J., Van Gestel, L., Coppens, J., de Block, T., Bangwen, E., Rutgers, J., Hens, M., De Vos, E., Coppens, S., Keyaerts, E., André, E., Rezende, A. M., Van Esbroeck, M., Vercauteren, K. & Liesenborghs, L., 2023, In: Archives of Virology. 168, 8, 210.Research output: Contribution to journal › A1: Web of Science-article › peer-review
Open AccessFile27 Downloads (Pure) -
Leveraging T-cell receptor - epitope recognition models to disentangle unique and cross-reactive T-cell response to SARS-CoV-2 during COVID-19 progression/resolution
Postovskaya, A., Vujkovic, A., de Block, T., van Petersen, L., van Frankenhuijsen, M., Brosius, I., Bottieau, E., Van Dijck, C., Theunissen, C., van Ierssel, S. H., Vlieghe, E., Bartholomeus, E., Mullan, K., Adriaensen, W., Vanham, G., Ogunjimi, B., Laukens, K., Vercauteren, K. & Meysman, P., 2023, In: Frontiers in Immunology. 14, 14 p., 1130876.Research output: Contribution to journal › A1: Web of Science-article › peer-review
Open AccessFile10 Downloads (Pure) -
Persistent morbidity in Clade IIb mpox patients: interim results of a long-term follow-up study, Belgium, June to November 2022
ITM Monkeypox Study Group, 2023, In: Eurosurveillance. 28, 7, 8 p.Research output: Contribution to journal › A1: Web of Science-article › peer-review
Open AccessFile14 Downloads (Pure)