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Deciphering the etiology of the 2024 outbreak of undiagnosed febrile illness in Panzi, Democratic Republic of the Congo

  • Tony Wawina-Bokalanga
  • , Jean-Claude Makangara-Cigolo
  • , Rilia Ola-Mpumbe
  • , Emmanuel Lokilo
  • , Francois Mwakisenda-Tshakotsho
  • , Mbonga Delphine
  • , Immaculee Kahindo
  • , Alphonse Tshonaka-Nkololo
  • , Emmanuel Hasivirwe Vakaniaki
  • , Nicholas Loman
  • , Sarah Houben
  • , Raphael Lumembe-Numbi
  • , Eddy Kinganda-Lusamaki
  • , Ange Ponga-Museme
  • , Yero Mukota-Nungu
  • , Anuj Kumar
  • , Matondo Meris
  • , Sam Wilkinson
  • , Raquel Colquhoun
  • , Kelly-Michel Kenye
  • Prince Akil-Bandali, Adrienne Amuri-Aziza, Gustavo Sganzerla Martinez, David J. Kelvin, Ronald Dijkman, Lisa E. Hensley, Cris Kasita, Franck Kafua-Wemba, Dieudonne Mwamba, Lorenzo Subissi, Nicole A. Hoff, Martine Peeters, Anne W. Rimoin, John L. Mokili, Octavie Lunguya-Metila, Edith Nkwembe, Andrew Rambaut, Laurens Liesenborghs, Nicola Low, Jason Kindrachuk, Koen Vercauteren, Robert Edwards, Jenna N. Kelly, Placide Mbala-Kingebeni, Steve Ahuka-Mundeke, Dieudonne Mumba, Jean-Jacques Muyembe-Tamfum

Research output: Contribution to journalA1: Peer-reviewed journal articlespeer-review

Abstract

In late 2024, an outbreak of over 400 cases of undiagnosed febrile illness, predominantly presenting as fever and cough, was reported in Panzi Health Zone, southwestern Democratic Republic of the Congo. Here we conducted an epidemiological and laboratory investigation to determine the etiology of the outbreak. Clinical data and specimens were prospectively collected from 108 individuals, of whom 59/108 (54.6%) were female. Children aged <5 years were the most affected (47/108, 43.5%); 14/32 (43.7%) were malnourished. Oro/nasopharyngeal swabs from 96/108 individuals were PCR tested; 26 blood samples were sequenced. Plasmodium falciparum was detected in 56/108 (51.8%) individuals. Co-infections were also detected, with influenza A(H1N1)pdm09 virus in 16/56 (28.6%) and severe acute respiratory syndrome coronavirus 2 in 10/56 (17.9%) individuals. No novel pathogens were detected via metagenomics. Our findings suggest that the outbreak was primarily associated with a surge in malaria cases, with concurrent viral respiratory infections. Increasing decentralized laboratory capacity and strengthening broader health systems remain crucial for faster outbreak detection and investigation.
Original languageEnglish
JournalNature Medicine
Volume32
Issue number4
Pages (from-to)1374-1382
Number of pages9
ISSN1078-8956
DOIs
Publication statusPublished - 18-Feb-2026

Keywords

  • Adolescent
  • Adult
  • COVID-19/epidemiology
  • Child
  • Child, Preschool
  • Coinfection/epidemiology
  • Democratic Republic of the Congo/epidemiology
  • Disease Outbreaks
  • Female
  • Fever of Unknown Origin/epidemiology
  • Fever/epidemiology
  • Humans
  • Infant
  • Influenza A Virus, H1N1 Subtype/isolation & purification
  • Malaria, Falciparum/epidemiology
  • Malaria/epidemiology
  • Male
  • Middle Aged
  • Plasmodium falciparum/isolation & purification
  • SARS-CoV-2/isolation & purification
  • Young Adult

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