Use of expressed sequence tags as an alternative approach for the identification of Taenia solium metacestode excretion/secretion proteins

B. Victor, P. Dorny, K. Kanobana, K. Polman, J. Lindh, A.M. Deelder, M. Palmblad, S. Gabriël

    Research output: Contribution to journalA2: International peer reviewed article (not A1-type)peer-review

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    Abstract

    BACKGROUND: Taenia solium taeniasis/cysticercosis is a zoonotic helminth infection mainly found in rural regions of Africa, Asia and Latin America. In endemic areas, diagnosis of cysticercosis largely depends on serology, but these methods have their drawbacks and require improvement. This implies better knowledge of the proteins secreted and excreted by the parasite. In a previous study, we used a custom protein database containing protein sequences from related helminths to identify T. solium metacestode excretion/secretion proteins. An alternative or complementary approach would be to use expressed sequence tags combined with BLAST and protein mapping to supercontigs of Echinococcus granulosus, a closely related cestode. In this study, we evaluate this approach and compare the results to those obtained in the previous study. FINDINGS: We report 297 proteins organized in 106 protein groups based on homology. Additional classification was done using Gene Ontology information on biological process and molecular function. Of the 106 protein groups, 58 groups were newly identified, while 48 groups confirmed previous findings. Blast2GO analysis revealed that the majority of the proteins were involved in catalytic activities and binding. CONCLUSIONS: In this study, we used translated expressed sequence tags combined with BLAST and mapping strategies to both confirm and complement previous research. Our findings are comparable to recent studies on other helminth genera like Echinococcus, Schistosoma and Clonorchis, indicating similarities between helminth excretion/secretion proteomes.
    Original languageEnglish
    JournalBMC Research Notes
    Volume6
    Pages (from-to)224
    ISSN1756-0500
    DOIs
    Publication statusPublished - 2013

    Keywords

    • Helminthic diseases
    • Zoonoses
    • Neurocysticercosis
    • Taenia solium
    • Metacestodes
    • Proteomics
    • Identification
    • Proteins
    • Expression
    • Sequencing
    • Classification
    • Peru
    • America-Latin
    • Zambia
    • Africa-Southern
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